R-IRanges |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/CHANGELOG.yml |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges-SPECPARTS |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges_2.30.1.tar.gz |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/R-IRanges.spec |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/sources |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/DESCRIPTION |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/NAMESPACE |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/NEWS |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/README.md |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/TODO |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/build |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/build/vignette.rds |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/CITATION |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/doc |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/doc/IRangesOverview.pdf |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/doc/IRangesOverview.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/doc/IRangesOverview.Rnw |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/extdata |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/extdata/ce2chrM.bed |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/extdata/ce2chrM.fa.out |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/extdata/hg18liftAll.lft |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/extdata/hs_b36v3_chrY.agp |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/include |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/include/_IRanges_stubs.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/include/IRanges_defines.h |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/include/IRanges_interface.h |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_AtomicList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_AtomicList-utils.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_coverage-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_DataFrame-utils.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_DataFrameList.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_extractList.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_findOverlaps-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_Grouping-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_HitsList.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_inter-range-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_intra-range-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_IPos-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_IRanges-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_IRanges-constructor.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_IRangesList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_NCList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_nearest-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_Ranges-comparison.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_RleViews.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_RleViewsList.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_seqapply.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_setops-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_split.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_splitListElements.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/inst/unitTests/test_tile-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/AtomicList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/AtomicList-utils.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/CompressedHitsList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/CompressedList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/coverage-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/DataFrameList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/extractList.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/extractListFragments.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/findOverlaps-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/Grouping-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/Hits-class-leftovers.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IntegerRanges-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IntegerRangesList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/inter-range-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/intra-range-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IPos-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IPosRanges-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IPosRanges-comparison.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IRanges-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IRanges-constructor.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IRanges-internals.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IRanges-utils.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/IRangesList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/MaskCollection-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/multisplit.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/NCList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/nearest-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/range-squeezers.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/RangedSelection-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/read.Mask.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/reverse-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/Rle-class-leftovers.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/RleViews-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/RleViewsList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/seqapply.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/setops-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/slice-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/Vector-class-leftovers.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/view-summarization-methods.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/Views-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/man/ViewsList-class.Rd |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/AtomicList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/AtomicList-utils.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/cbind-Rle-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/CompressedAtomicList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/CompressedDataFrameList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/CompressedGrouping-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/CompressedHitsList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/CompressedList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/CompressedList-comparison.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/CompressedRangesList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/coverage-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/cvg-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/DataFrameList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/DataFrameList-utils.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/extractList.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/extractListFragments.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/findOverlaps-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/Grouping-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/Hits-class-leftovers.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IntegerRangesList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/inter-range-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/intra-range-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IPos-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IPosList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IPosRanges-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IPosRanges-comparison.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IRanges-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IRanges-constructor.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IRanges-utils.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/IRangesList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/MaskCollection-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/multisplit.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/NCList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/nearest-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/range-squeezers.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/RangedSelection-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/Ranges-and-RangesList-classes.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/read.Mask.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/reverse-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/Rle-class-leftovers.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/RleViews-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/RleViews-utils.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/RleViewsList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/RleViewsList-utils.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/seqapply.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/setops-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/SimpleGrouping-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/slice-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/subsetting-utils.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/tile-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/Vector-class-leftovers.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/Views-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/ViewsList-class.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/windows-methods.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/R/zzz.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/CompressedAtomicList_utils.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/CompressedIRangesList_class.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/CompressedList_class.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/coverage_methods.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/extractListFragments.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/Grouping_class.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/inter_range_methods.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/IPosRanges_comparison.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/IRanges.h |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/IRanges_class.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/IRanges_constructor.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/NCList.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/R_init_IRanges.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/Ranges_class.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/RleViews_utils.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/S4Vectors_stubs.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/src/SimpleIRangesList_class.c |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/tests |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/tests/run_unitTests.R |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/vignettes |
directory |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
R-IRanges/IRanges/IRanges/vignettes/IRangesOverview.Rnw |
file |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|