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apbs/apbs-3.0.0/contrib/iapbs/modules/Amber/test/apbs_solv/2ala.prmcrd |
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apbs/apbs-3.0.0/contrib/iapbs/modules/Amber/test/Minimization |
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apbs/apbs-3.0.0/examples/actin-dimer/complex.pqr |
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apbs/apbs-3.0.0/examples/actin-dimer/mesh.m |
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apbs/apbs-3.0.0/examples/actin-dimer/mol1.pqr |
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apbs/apbs-3.0.0/examples/actin-dimer/mol2.pqr |
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apbs/apbs-3.0.0/examples/actin-dimer/README.md |
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apbs/apbs-3.0.0/examples/actin-dimer/UHBD |
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apbs/apbs-3.0.0/examples/actin-dimer/UHBD/aheall-atom.charmm.dat |
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apbs/apbs-3.0.0/examples/actin-dimer/UHBD/nuc.3-4.full.log |
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apbs/apbs-3.0.0/examples/actin-dimer/UHBD/nuc.3-4.inp |
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apbs/apbs-3.0.0/examples/actin-dimer/UHBD/prot3.pdb |
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apbs/apbs-3.0.0/examples/actin-dimer/UHBD/prot4.pdb |
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apbs/apbs-3.0.0/examples/actin-dimer/UHBD/single.inp |
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apbs/apbs-3.0.0/examples/actin-dimer/UHBD/srsrf.dot |
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apbs/apbs-3.0.0/examples/alkanes |
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apbs/apbs-3.0.0/examples/alkanes/2-methylbutane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/alkanes.in |
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apbs/apbs-3.0.0/examples/alkanes/apbs-forces.in |
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apbs/apbs-3.0.0/examples/alkanes/butane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/cyclohexane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/cyclopentane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/ethane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/force.result |
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apbs/apbs-3.0.0/examples/alkanes/hexane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/isobutane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/Makefile.in |
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apbs/apbs-3.0.0/examples/alkanes/methane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/mol.pdb |
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apbs/apbs-3.0.0/examples/alkanes/neopentane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/parm.dat |
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apbs/apbs-3.0.0/examples/alkanes/pentane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/propane.pdb |
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apbs/apbs-3.0.0/examples/alkanes/README.md |
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apbs/apbs-3.0.0/examples/bem |
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apbs/apbs-3.0.0/examples/bem/1a63_msms.in |
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apbs/apbs-3.0.0/examples/bem/1a63_NanoShaper_SES.in |
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apbs/apbs-3.0.0/examples/bem/1a63_NanoShaper_Skin.in |
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apbs/apbs-3.0.0/examples/bem/451c_order1.in |
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apbs/apbs-3.0.0/examples/bem/451c_order5.in |
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apbs/apbs-3.0.0/examples/bem/README.md |
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apbs/apbs-3.0.0/examples/bem/test_proteins |
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apbs/apbs-3.0.0/examples/bem/test_proteins/1a63.pqr |
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apbs/apbs-3.0.0/examples/bem/test_proteins/1ajj.pqr |
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apbs/apbs-3.0.0/examples/bem/test_proteins/1bbl.pqr |
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apbs/apbs-3.0.0/examples/bem/test_proteins/451c.pqr |
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apbs/apbs-3.0.0/examples/bem/test_proteins/oneb.pqr |
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apbs/apbs-3.0.0/examples/bem/test_proteins/twob.pqr |
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apbs/apbs-3.0.0/examples/bem/test_proteins/twob2.pqr |
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apbs/apbs-3.0.0/examples/bem-binding-energy |
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apbs/apbs-3.0.0/examples/bem-binding-energy/1d30.in |
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apbs/apbs-3.0.0/examples/bem-binding-energy/1d30_monomer1.in |
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apbs/apbs-3.0.0/examples/bem-binding-energy/1d30_monomer2.in |
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apbs/apbs-3.0.0/examples/bem-binding-energy/README.md |
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apbs/apbs-3.0.0/examples/bem-binding-energy/test_proteins |
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apbs/apbs-3.0.0/examples/bem-binding-energy/test_proteins/1d30.pqr |
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apbs/apbs-3.0.0/examples/bem-binding-energy/test_proteins/1d30_monomer1.pqr |
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apbs/apbs-3.0.0/examples/bem-binding-energy/test_proteins/1d30_monomer2.pqr |
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apbs/apbs-3.0.0/examples/bem-pKa |
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apbs/apbs-3.0.0/examples/bem-pKa/2LZT-ASH66.in |
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apbs/apbs-3.0.0/examples/bem-pKa/2LZT-ASP66.in |
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apbs/apbs-3.0.0/examples/bem-pKa/2LZT-noASH66.in |
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apbs/apbs-3.0.0/examples/bem-pKa/2LZT-noASP66.in |
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apbs/apbs-3.0.0/examples/bem-pKa/ASH66.in |
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apbs/apbs-3.0.0/examples/bem-pKa/ASP66.in |
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apbs/apbs-3.0.0/examples/bem-pKa/README.md |
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apbs/apbs-3.0.0/examples/bem-pKa/test_proteins |
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apbs/apbs-3.0.0/examples/bem-pKa/test_proteins/2LZT-ASH66.pqr |
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apbs/apbs-3.0.0/examples/bem-pKa/test_proteins/2LZT-ASP66.pqr |
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apbs/apbs-3.0.0/examples/bem-pKa/test_proteins/2LZT-noASH66.pqr |
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apbs/apbs-3.0.0/examples/bem-pKa/test_proteins/2LZT-noASP66.pqr |
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apbs/apbs-3.0.0/examples/bem-pKa/test_proteins/ASH66.pqr |
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apbs/apbs-3.0.0/examples/bem-pKa/test_proteins/ASP66.pqr |
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apbs/apbs-3.0.0/examples/born |
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apbs/apbs-3.0.0/examples/born/apbs-apolar.in |
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apbs/apbs-3.0.0/examples/born/apbs-forces.in |
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apbs/apbs-3.0.0/examples/born/apbs-mol-auto.in |
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apbs/apbs-3.0.0/examples/born/apbs-mol-fem-extmesh.in |
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apbs/apbs-3.0.0/examples/born/apbs-mol-fem.in |
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apbs/apbs-3.0.0/examples/born/apbs-mol-parallel.in |
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apbs/apbs-3.0.0/examples/born/apbs-smol-auto.in |
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apbs/apbs-3.0.0/examples/born/apbs-smol-fem.in |
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apbs/apbs-3.0.0/examples/born/apbs-smol-parallel.in |
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apbs/apbs-3.0.0/examples/born/apolarforces |
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apbs/apbs-3.0.0/examples/born/ion.pqr |
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apbs/apbs-3.0.0/examples/born/ion.xml |
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apbs/apbs-3.0.0/examples/born/mesh.m |
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apbs/apbs-3.0.0/examples/born/parm.dat |
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apbs/apbs-3.0.0/examples/born/pmf.dat |
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apbs/apbs-3.0.0/examples/born/polarforces |
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apbs/apbs-3.0.0/examples/born/README.md |
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apbs/apbs-3.0.0/examples/FKBP |
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apbs/apbs-3.0.0/examples/FKBP/1d7h-dmso-complex.pqr |
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apbs/apbs-3.0.0/examples/FKBP/1d7h-dmso-mol.in |
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apbs/apbs-3.0.0/examples/FKBP/1d7h-dmso-smol.in |
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apbs/apbs-3.0.0/examples/FKBP/1d7h-min.pqr |
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apbs/apbs-3.0.0/examples/FKBP/1d7i-dss-complex.pqr |
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apbs/apbs-3.0.0/examples/FKBP/1d7i-dss-mol.in |
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apbs/apbs-3.0.0/examples/FKBP/1d7i-dss-smol.in |
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apbs/apbs-3.0.0/examples/FKBP/1d7i-min.pqr |
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apbs/apbs-3.0.0/examples/FKBP/dmso-min.pqr |
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apbs/apbs-3.0.0/examples/FKBP/dss-min.pqr |
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apbs/apbs-3.0.0/examples/FKBP/README.md |
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apbs/apbs-3.0.0/examples/FKBP/1d7h-dmso |
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apbs/apbs-3.0.0/examples/FKBP/1d7i-dss/UHBD |
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apbs/apbs-3.0.0/examples/FKBP/1d7i-dss/UHBD/bindf.inp |
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apbs/apbs-3.0.0/examples/geoflow |
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apbs/apbs-3.0.0/examples/hca-bind |
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apbs/apbs-3.0.0/examples/hca-bind/acet.pqr |
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apbs/apbs-3.0.0/examples/hca-bind/UHBD |
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apbs/apbs-3.0.0/examples/hca-bind/UHBD/bindf-nmap.err |
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apbs/apbs-3.0.0/examples/hca-bind/UHBD/srsrf.dot |
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apbs/apbs-3.0.0/examples/helix |
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apbs/apbs-3.0.0/examples/helix/Apbs_dummy-TEMPLATE.in |
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apbs/apbs-3.0.0/examples/helix/Run_membrane-helix.sh |
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apbs/apbs-3.0.0/examples/ion-pmf |
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apbs/apbs-3.0.0/examples/ion-pmf/apolarforces |
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apbs/apbs-3.0.0/examples/ion-protein |
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apbs/apbs-3.0.0/examples/ion-protein/491.pqr |
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apbs/apbs-3.0.0/examples/ion-protein/apbs-mol-pdiel12.in |
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apbs/apbs-3.0.0/examples/ion-protein/small491.pqr |
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apbs/apbs-3.0.0/examples/ion-protein/UHBD |
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apbs/apbs-3.0.0/examples/ion-protein/UHBD/491.pdb |
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apbs/apbs-3.0.0/examples/ionize |
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apbs/apbs-3.0.0/examples/ionize/acetate.pqr |
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apbs/apbs-3.0.0/examples/ionize/UHBD |
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apbs/apbs-3.0.0/examples/ionize/UHBD/elec.dat.exam |
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apbs/apbs-3.0.0/examples/ionize/UHBD/elec.inp.exam |
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apbs/apbs-3.0.0/examples/ionize/UHBD/elec.out.orig.exam |
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apbs/apbs-3.0.0/examples/ionize/UHBD/elec.pdb.exam |
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apbs/apbs-3.0.0/examples/membrane |
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apbs/apbs-3.0.0/examples/misc/achbp.pqr |
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apbs/apbs-3.0.0/examples/opal |
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apbs/apbs-3.0.0/examples/opal/actin-complex.pqr |
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apbs/apbs-3.0.0/examples/opal/actin-dimer-para.in |
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apbs/apbs-3.0.0/examples/opal/actin-dimer.in |
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apbs/apbs-3.0.0/examples/opal/actin-mol1.pqr |
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apbs/apbs-3.0.0/examples/opal/actin-mol2.pqr |
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apbs/apbs-3.0.0/examples/opal/born.xml |
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apbs/apbs-3.0.0/examples/opal/README.md |
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apbs/apbs-3.0.0/examples/pbam |
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apbs/apbs-3.0.0/examples/pbam/1a63.in |
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apbs/apbs-3.0.0/examples/pbam/1a63.pqr |
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apbs/apbs-3.0.0/examples/pbam/neg_1.xyz |
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apbs/apbs-3.0.0/examples/pbam/neg_2.xyz |
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apbs/apbs-3.0.0/examples/pbam/neg_3.xyz |
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apbs/apbs-3.0.0/examples/pbam/neg_charge.pqr |
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apbs/apbs-3.0.0/examples/pbam/pos_1.xyz |
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apbs/apbs-3.0.0/examples/pbam/pos_charge.pqr |
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apbs/apbs-3.0.0/examples/pbam/README.md |
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apbs/apbs-3.0.0/examples/pbam/toy_dynamics.in |
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apbs/apbs-3.0.0/examples/pbam/toy_electrostatic.in |
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apbs/apbs-3.0.0/examples/pbam/toy_energyforce.in |
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apbs/apbs-3.0.0/examples/pbsam-barn_bars |
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apbs/apbs-3.0.0/examples/pbsam-barn_bars/barn_bars_electro.in |
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apbs/apbs-3.0.0/examples/pbsam-barn_bars/barnase.pqr |
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apbs/apbs-3.0.0/examples/pbsam-barn_bars/barstar.pqr |
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apbs/apbs-3.0.0/examples/pbsam-gly |
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apbs/apbs-3.0.0/examples/pbsam-gly/gly.pqr |
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apbs/apbs-3.0.0/examples/pbsam-gly/gly.vert |
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apbs/apbs-3.0.0/examples/pbsam-gly/gly_cg.pqr |
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apbs/apbs-3.0.0/examples/pbsam-gly/gly_cg2.pqr |
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apbs/apbs-3.0.0/examples/pbsam-gly/README.md |
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apbs/apbs-3.0.0/examples/pbsam-gly/traj_2_2.xyz |
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apbs/apbs-3.0.0/examples/pbsam-gly/msms |
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apbs/apbs-3.0.0/examples/pbsam-gly/msms/gly_electrostatic.in |
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apbs/apbs-3.0.0/examples/pbsam-gly/msms/gly_msms.pqr |
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apbs/apbs-3.0.0/examples/pka-lig |
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apbs/apbs-3.0.0/examples/pka-lig/apbs-mol-surf.in |
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apbs/apbs-3.0.0/examples/pka-lig/apbs-mol-vdw.in |
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apbs/apbs-3.0.0/examples/pka-lig/apbs-smol-surf.in |
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apbs/apbs-3.0.0/examples/pka-lig/apbs-smol-vdw.in |
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apbs/apbs-3.0.0/examples/pka-lig/bx6_7_apo_apbs.pqr |
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apbs/apbs-3.0.0/examples/pka-lig/bx6_7_bin_apbs.pqr |
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apbs/apbs-3.0.0/examples/pka-lig/bx6_7_lig_apbs.pqr |
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apbs/apbs-3.0.0/examples/pka-lig/README.md |
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apbs/apbs-3.0.0/examples/pka-lig/UHBD |
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apbs/apbs-3.0.0/examples/pka-lig/UHBD/README |
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apbs/apbs-3.0.0/examples/pka-lig/UHBD/uhbd1-apo.out |
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apbs/apbs-3.0.0/examples/pka-lig/UHBD/uhbd1-bin.out |
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apbs/apbs-3.0.0/examples/pka-lig/UHBD/uhbd1-lig.out |
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apbs/apbs-3.0.0/examples/pka-lig/UHBD/uhbd2-apo.out |
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apbs/apbs-3.0.0/examples/pka-lig/UHBD/uhbd2-bin.out |
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apbs/apbs-3.0.0/examples/pka-lig/UHBD/uhbd2-lig.out |
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apbs/apbs-3.0.0/examples/point-pmf |
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apbs/apbs-3.0.0/examples/point-pmf/apbs.in |
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apbs/apbs-3.0.0/examples/point-pmf/complex-0_1.pqr |
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apbs/apbs-3.0.0/examples/point-pmf/energy.dat |
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apbs/apbs-3.0.0/examples/point-pmf/mol0.pqr |
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apbs/apbs-3.0.0/examples/point-pmf/mol1.pqr |
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apbs/apbs-3.0.0/examples/point-pmf/mol2.pqr |
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apbs/apbs-3.0.0/examples/point-pmf/mol3.pqr |
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apbs/apbs-3.0.0/examples/point-pmf/mol4.pqr |
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apbs/apbs-3.0.0/examples/point-pmf/README.md |
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apbs/apbs-3.0.0/examples/point-pmf/runme.sh |
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apbs/apbs-3.0.0/examples/protein-rna |
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apbs/apbs-3.0.0/examples/protein-rna/apbs_dx.py |
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apbs/apbs-3.0.0/examples/protein-rna/dxmath.txt |
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apbs/apbs-3.0.0/examples/protein-rna/fit.py |
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apbs/apbs-3.0.0/examples/protein-rna/Makefile.am |
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apbs/apbs-3.0.0/examples/protein-rna/model_outBoxB19.pqr |
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apbs/apbs-3.0.0/examples/protein-rna/model_outNB.pqr |
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apbs/apbs-3.0.0/examples/protein-rna/model_outNpep.pqr |
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apbs/apbs-3.0.0/examples/protein-rna/postprocess.sh |
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apbs/apbs-3.0.0/examples/protein-rna/README.md |
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apbs/apbs-3.0.0/examples/protein-rna/run_apdx_files.sh |
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apbs/apbs-3.0.0/examples/protein-rna/template.txt |
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apbs/apbs-3.0.0/examples/protein-rna/test.sh |
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apbs/apbs-3.0.0/examples/protein-rna/PDB |
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apbs/apbs-3.0.0/examples/protein-rna/PDB/model_outBoxB19.pdb |
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apbs/apbs-3.0.0/examples/protein-rna/PDB/model_outNB.pdb |
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apbs/apbs-3.0.0/examples/protein-rna/PDB/model_outNpep.pdb |
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apbs/apbs-3.0.0/examples/smpbe |
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apbs/apbs-3.0.0/examples/smpbe/24dup.pqr |
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apbs/apbs-3.0.0/examples/smpbe/apbs-smpbe-24dup.in |
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apbs/apbs-3.0.0/examples/smpbe/apbs-smpbe-ion.in |
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apbs/apbs-3.0.0/examples/smpbe/ion.pqr |
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apbs/apbs-3.0.0/include/Eigen/src/Core/arch |
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apbs/apbs-3.0.0/include/Eigen/src/Core/arch/AltiVec |
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apbs/apbs-3.0.0/include/Eigen/src/Core/arch/Default |
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apbs/apbs-3.0.0/include/Eigen/src/Core/arch/Default/Settings.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/arch/NEON |
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apbs/apbs-3.0.0/include/Eigen/src/Core/arch/SSE |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/CMakeLists.txt |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/CoeffBasedProduct.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/GeneralMatrixMatrix.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_MKL.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/GeneralMatrixVector.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/Parallelizer.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/SelfadjointMatrixMatrix.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/SelfadjointMatrixMatrix_MKL.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/SelfadjointMatrixVector.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/SelfadjointMatrixVector_MKL.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/TriangularMatrixMatrix.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/TriangularMatrixMatrix_MKL.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/TriangularMatrixVector.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/TriangularMatrixVector_MKL.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/products/TriangularSolverMatrix.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/util |
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apbs/apbs-3.0.0/include/Eigen/src/Core/util/BlasUtil.h |
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apbs/apbs-3.0.0/include/Eigen/src/Core/util/StaticAssert.h |
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apbs/apbs-3.0.0/include/Eigen/src/plugins/CommonCwiseBinaryOps.h |
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apbs/apbs-3.0.0/include/Eigen/src/QR |
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apbs/apbs-3.0.0/include/Eigen/src/QR/ColPivHouseholderQR.h |
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apbs/apbs-3.0.0/include/Eigen/src/QR/FullPivHouseholderQR.h |
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apbs/apbs-3.0.0/include/Eigen/src/QR/HouseholderQR_MKL.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCholesky |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCholesky/CMakeLists.txt |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCholesky/SimplicialCholesky.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/AmbiVector.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/CompressedStorage.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/MappedSparseMatrix.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseCwiseUnaryOp.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseDenseProduct.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseDiagonalProduct.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseDot.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseFuzzy.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseMatrix.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseMatrixBase.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparsePermutation.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseProduct.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseRedux.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseSelfAdjointView.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseSparseProductWithPruning.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseTranspose.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseTriangularView.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseUtil.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseVector.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/SparseView.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseCore/TriangularSolver.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/CMakeLists.txt |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_column_bmod.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_column_dfs.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_gemm_kernel.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_kernel_bmod.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_Memory.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_panel_bmod.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_panel_dfs.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_pivotL.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_pruneL.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_relax_snode.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLU_Utils.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseLU/SparseLUImpl.h |
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apbs/apbs-3.0.0/include/Eigen/src/SparseQR |
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apbs/apbs-3.0.0/include/Eigen/src/SparseQR/CMakeLists.txt |
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apbs/apbs-3.0.0/include/Eigen/src/SparseQR/SparseQR.h |
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apbs/apbs-3.0.0/include/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h |
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apbs/apbs-3.0.0/include/Eigen/src/StlSupport |
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apbs/apbs-3.0.0/src/fem/vpee.c |
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apbs/apbs-3.0.0/src/generic |
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apbs/apbs-3.0.0/src/generic/apolparm.c |
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apbs/apbs-3.0.0/src/generic/bemparm.c |
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apbs/apbs-3.0.0/src/generic/bemparm.h |
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apbs/apbs-3.0.0/src/generic/CMakeLists.txt |
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apbs/apbs-3.0.0/src/generic/femparm.c |
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apbs/apbs-3.0.0/src/generic/femparm.h |
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apbs/apbs-3.0.0/src/generic/geoflowparm.c |
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apbs/apbs-3.0.0/src/generic/geoflowparm.h |
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apbs/apbs-3.0.0/src/generic/mgparm.c |
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apbs/apbs-3.0.0/src/generic/mgparm.h |
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apbs/apbs-3.0.0/src/generic/nosh.c |
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apbs/apbs-3.0.0/src/generic/nosh.h |
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apbs/apbs-3.0.0/src/generic/pbamparm.c |
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apbs/apbs-3.0.0/src/generic/pbamparm.h |
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apbs/apbs-3.0.0/src/generic/pbeparm.c |
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apbs/apbs-3.0.0/src/generic/pbeparm.h |
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apbs/apbs-3.0.0/src/generic/pbsamparm.c |
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apbs/apbs-3.0.0/src/generic/pbsamparm.h |
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apbs/apbs-3.0.0/src/generic/vacc.c |
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apbs/apbs-3.0.0/src/generic/vacc.h |
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apbs/apbs-3.0.0/src/generic/valist.c |
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apbs/apbs-3.0.0/src/generic/valist.h |
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apbs/apbs-3.0.0/src/generic/vatom.c |
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apbs/apbs-3.0.0/src/generic/vatom.h |
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apbs/apbs-3.0.0/src/generic/vcap.c |
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apbs/apbs-3.0.0/src/generic/vcap.h |
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apbs/apbs-3.0.0/src/generic/vclist.c |
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apbs/apbs-3.0.0/src/generic/vclist.h |
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apbs/apbs-3.0.0/src/generic/vgreen.c |
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apbs/apbs-3.0.0/src/generic/vgreen.h |
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apbs/apbs-3.0.0/src/generic/vhal.h |
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apbs/apbs-3.0.0/src/generic/vmatrix.h |
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apbs/apbs-3.0.0/src/generic/vparam.c |
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apbs/apbs-3.0.0/src/generic/vparam.h |
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apbs/apbs-3.0.0/src/generic/vpbe.c |
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apbs/apbs-3.0.0/src/generic/vpbe.h |
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apbs/apbs-3.0.0/src/generic/vstring.c |
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apbs/apbs-3.0.0/src/generic/vstring.h |
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apbs/apbs-3.0.0/src/generic/vunit.h |
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apbs/apbs-3.0.0/src/mg |
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apbs/apbs-3.0.0/src/mg/CMakeLists.txt |
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apbs/apbs-3.0.0/src/mg/vgrid.c |
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apbs/apbs-3.0.0/src/mg/vgrid.h |
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apbs/apbs-3.0.0/src/mg/vmgrid.c |
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apbs/apbs-3.0.0/src/mg/vmgrid.h |
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apbs/apbs-3.0.0/src/mg/vopot.c |
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apbs/apbs-3.0.0/src/mg/vopot.h |
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apbs/apbs-3.0.0/src/mg/vpmg.c |
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apbs/apbs-3.0.0/src/mg/vpmg.h |
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apbs/apbs-3.0.0/src/mg/vpmgp.c |
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apbs/apbs-3.0.0/src/mg/vpmgp.h |
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apbs/apbs-3.0.0/src/pmgc |
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apbs/apbs-3.0.0/src/pmgc/buildAd.c |
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apbs/apbs-3.0.0/src/pmgc/buildAd.h |
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apbs/apbs-3.0.0/src/pmgc/buildBd.c |
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apbs/apbs-3.0.0/src/pmgc/buildBd.h |
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apbs/apbs-3.0.0/src/pmgc/buildGd.c |
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apbs/apbs-3.0.0/src/pmgc/buildGd.h |
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apbs/apbs-3.0.0/src/pmgc/buildPd.c |
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apbs/apbs-3.0.0/src/pmgc/buildPd.h |
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apbs/apbs-3.0.0/src/pmgc/cgd.c |
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apbs/apbs-3.0.0/src/pmgc/cgd.h |
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apbs/apbs-3.0.0/src/pmgc/CMakeLists.txt |
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apbs/apbs-3.0.0/src/pmgc/gsd.c |
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apbs/apbs-3.0.0/src/pmgc/gsd.h |
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apbs/apbs-3.0.0/src/pmgc/matvecd.c |
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apbs/apbs-3.0.0/src/pmgc/matvecd.h |
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apbs/apbs-3.0.0/src/pmgc/mgcsd.c |
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apbs/apbs-3.0.0/src/pmgc/mgcsd.h |
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apbs/apbs-3.0.0/src/pmgc/mgdrvd.c |
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apbs/apbs-3.0.0/src/pmgc/mgdrvd.h |
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apbs/apbs-3.0.0/src/pmgc/mgfasd.c |
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apbs/apbs-3.0.0/src/pmgc/mgfasd.h |
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apbs/apbs-3.0.0/src/pmgc/mgsubd.c |
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apbs/apbs-3.0.0/src/pmgc/mgsubd.h |
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apbs/apbs-3.0.0/src/pmgc/mikpckd.c |
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apbs/apbs-3.0.0/src/pmgc/mikpckd.h |
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apbs/apbs-3.0.0/src/pmgc/mlinpckd.c |
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apbs/apbs-3.0.0/src/pmgc/mlinpckd.h |
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apbs/apbs-3.0.0/src/pmgc/mypdec.c |
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apbs/apbs-3.0.0/src/pmgc/mypdec.h |
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apbs/apbs-3.0.0/src/pmgc/newdrvd.c |
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apbs/apbs-3.0.0/src/pmgc/newdrvd.h |
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apbs/apbs-3.0.0/src/pmgc/newtond.c |
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apbs/apbs-3.0.0/src/pmgc/newtond.h |
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apbs/apbs-3.0.0/src/pmgc/PMG-README.txt |
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apbs/apbs-3.0.0/src/pmgc/powerd.c |
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apbs/apbs-3.0.0/src/pmgc/powerd.h |
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apbs/apbs-3.0.0/src/pmgc/README.txt |
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apbs/apbs-3.0.0/src/pmgc/smoothd.c |
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apbs/apbs-3.0.0/src/pmgc/smoothd.h |
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apbs/apbs-3.0.0/tests |
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apbs/apbs-3.0.0/tests/apbs_check_forces.py |
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apbs/apbs-3.0.0/tests/apbs_check_intermediate_energies.py |
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apbs/apbs-3.0.0/tests/apbs_check_results.py |
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apbs/apbs-3.0.0/tests/apbs_logger.py |
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apbs/apbs-3.0.0/tests/apbs_tester.py |
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apbs/apbs-3.0.0/tests/README.md |
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apbs/apbs-3.0.0/tests/run_travis_test.sh |
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apbs/apbs-3.0.0/tests/test_cases.cfg |
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apbs/apbs-3.0.0/tests/test_cases.cfg.exclude_tests |
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apbs/apbs-3.0.0/tools |
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apbs/apbs-3.0.0/tools/CMakeLists.txt |
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apbs/apbs-3.0.0/tools/osx/APBS.iconset/icon_256x256@2x.png |
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apbs/apbs-3.0.0/tools/osx/APBS.iconset/icon_32x32.png |
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apbs/apbs-3.0.0/tools/osx/APBS.iconset/icon_32x32@2x.png |
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apbs/apbs-3.0.0/tools/osx/APBS.iconset/icon_512x512.png |
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apbs/apbs-3.0.0/tools/osx/APBS.iconset/icon_512x512@2x.png |
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apbs/apbs-3.0.0/tools/python |
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apbs/apbs-3.0.0/tools/python/apbs.in |
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apbs/apbs-3.0.0/tools/python/apbslib.c |
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apbs/apbs-3.0.0/tools/python/apbslib.i |
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apbs/apbs-3.0.0/tools/python/apbslib_wrap.doc |
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apbs/apbs-3.0.0/tools/python/CMakeLists.txt |
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apbs/apbs-3.0.0/tools/python/ion.pqr |
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apbs/apbs-3.0.0/tools/python/main.py |
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apbs/apbs-3.0.0/tools/python/Makefile |
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apbs/apbs-3.0.0/tools/python/Makefile.am |
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apbs/apbs-3.0.0/tools/python/Makefile.in |
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apbs/apbs-3.0.0/tools/python/noinput.py |
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apbs/apbs-3.0.0/tools/python/README |
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apbs/apbs-3.0.0/tools/python/vgrid |
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apbs/apbs-3.0.0/tools/python/vgrid/average.py |
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apbs/apbs-3.0.0/tools/python/vgrid/Makefile |
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apbs/apbs-3.0.0/tools/python/vgrid/Makefile.am |
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apbs/apbs-3.0.0/tools/python/vgrid/Makefile.in |
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apbs/apbs-3.0.0/tools/python/vgrid/mergedx.py |
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apbs/apbs-3.0.0/tools/python/vgrid/read.py |
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apbs/apbs-3.0.0/tools/python/vgrid/README |
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apbs/apbs-3.0.0/tools/python/vgrid/vgrid.i |
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apbs/apbs-3.0.0/tools/python/vgrid/vgrid.py |
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apbs/apbs-3.0.0/tools/python/vgrid/vgridlib.c |
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apbs/apbs-3.0.0/tools/visualization |
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apbs/apbs-3.0.0/tools/visualization/opendx |
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apbs/apbs-3.0.0/tools/visualization/opendx/multipot.cfg |
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apbs/apbs-3.0.0/tools/visualization/opendx/multipot.net |
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apbs/apbs-3.0.0/tools/visualization/opendx/pot.cfg |
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apbs/apbs-3.0.0/tools/visualization/opendx/pot.cm |
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apbs/apbs-3.0.0/tools/visualization/opendx/pot.net |
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apbs/apbs-3.0.0/tools/visualization/opendx/potacc.cfg |
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apbs/apbs-3.0.0/tools/visualization/opendx/potacc.cm |
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apbs/apbs-3.0.0/tools/visualization/opendx/potacc.net |
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apbs/apbs-3.0.0/tools/visualization/opendx/surface.cfg |
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apbs/apbs-3.0.0/tools/visualization/opendx/surface.net |
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apbs/apbs-3.0.0/tools/windows |
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apbs/apbs-3.0.0/tools/windows/README.txt |
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apbs/apbs-3.0.0/tools/windows/command-line support |
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apbs/apbs-3.0.0/tools/windows/command-line support/apbs-cli.bat |
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apbs/apbs-3.0.0/tools/windows/configuration headers |
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apbs/apbs-3.0.0/tools/windows/configuration headers/apbscfg.h |
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apbs/apbs-3.0.0/tools/windows/configuration headers/maloccf.h |
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apbs/apbs-3.0.0/tools/windows/NSI configuration |
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apbs/apbs-3.0.0/tools/windows/NSI configuration/apbs.nsi |
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apbs/apbs-3.0.0/tools/windows/visual studio property pages |
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apbs/apbs-3.0.0/tools/windows/visual studio property pages/Debug build properties.props |
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apbs/apbs-3.0.0/tools/windows/visual studio property pages/Generic build properties.props |
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apbs/apbs-3.0.0/tools/windows/visual studio property pages/Release build properties.props |
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